Package: TraMineRextras 0.6.8

TraMineRextras: TraMineR Extension

Collection of ancillary functions and utilities to be used in conjunction with the 'TraMineR' package for sequence data exploration. Includes, among others, specific functions such as state survival plots, position-wise group-typical states, dynamic sequence indicators, and dissimilarities between event sequences. Also includes contributions by non-members of the TraMineR team such as methods for polyadic data and for the comparison of groups of sequences.

Authors:Gilbert Ritschard [aut, cre, ths, cph], Matthias Studer [aut], Reto Buergin [aut], Tim F. Liao [ctb], Alexis Gabadinho [ctb], Pierre-Alexandre Fonta [ctb], Nicolas S. Muller [ctb], Patrick Rousset [ctb]

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TraMineRextras.pdf |TraMineRextras.html✨
TraMineRextras/json (API)
NEWS

# Install 'TraMineRextras' in R:
install.packages('TraMineRextras', repos = c('https://traminer.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

42 exports 0.61 score 17 dependencies 1 dependents 81 scripts 825 downloads

Last updated 1 months agofrom:9a0c397d6d. Checks:OK: 9. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 17 2024
R-4.5-win-x86_64OKSep 17 2024
R-4.5-linux-x86_64OKSep 17 2024
R-4.4-win-x86_64OKSep 17 2024
R-4.4-mac-x86_64OKSep 17 2024
R-4.4-mac-aarch64OKSep 17 2024
R-4.3-win-x86_64OKSep 17 2024
R-4.3-mac-x86_64OKSep 17 2024
R-4.3-mac-aarch64OKSep 17 2024

Exports:convert.gcreatedatadiscretedissComparedissindicdissvar.grpFCE_to_TSEgroup.pHSPELL_to_STSpamwardrowmodeseqautoseqBICseqCompareseqctaseqe2stmseqedistseqedplotseqemltseqentransseqerulesdiscseqgen.missingseqgranularityseqimplicseqindic.dynseqLRTseqplot.rfseqplot.tentropseqplot.tentrop.mseqpolyadsseqrep.grpseqsammseqsammehaseqsammseqseqshaseqsplotseqstartseqsurvseqtabstoccsortisortvtoPersonPeriodTSE_to_STS

Dependencies:bootclustercodetoolscolorspacedoParallelforeachiteratorslatticeMASSMatrixmgcvnlmepermuteRColorBrewersurvivalTraMineRvegan

Readme and manuals

Help Manual

Help pageTopics
TraMineR ExtensionTraMineRextras-package TraMineRextras
Converting between graphical formatsconvert.g
Transform time to event data into a discrete data formatcreatedatadiscrete
Sequence marginality and gain indicators.dissindic
Discrepancy by group.dissvar.grp
Data conversion from Fixed Column Event format to TSE.FCE_to_TSE
Adds proportion of occurrences to each level namesgroup.p
Data conversion from Horizontal Spell to STS.HSPELL_to_STS
PAM from k-solution of hierarchical clusteringpamward
Dynamic index plotplot.dynin
Emlt Plotsplot.emlt
Plot method for objects produced by the seqsurv functionplot.stslist.surv
Polyadic data examplepolyads
Modal state of a variablerowmode
Auto-association between statesseqauto
BIC and Likelihood ratio test for comparing two groupsdissCompare seqBIC seqCompare seqLRT
Competing Trajectory Analysis (CTA)seqcta
Definition of an events to states matrix.seqe2stm
Distances between event sequencesseqedist
Graphical representation of a set of events sequences.seqedplot
Euclidean Coordinates for Longitudinal Timelinesseqemlt
Event sequence length and number of eventsseqentrans
Extract association rules using discrete time regression modelsseqerulesdisc
Generate random missing elements within a state sequence objectseqgen.missing
Changing sequence time granularity by aggregating positionsseqgranularity
Position wise group-typical statesplot.seqimplic print.seqimplic seqimplic
Dynamic indexprint.dynin seqindic.dyn
Relative Frequency Sequence Plots.seqplot.rf
Plotting superposed transversal-entropy curvesseqplot.tentrop seqplot.tentrop.m
Measuring the Degree of Within-Polyadic Similaritiesseqpolyads
Finding representative sets by group and their quality statistics.seqrep.grp
Sequence Analysis Multistate Model (SAMM) procedureplot.SAMM seqsamm seqsammeha seqsammseq
Sequence History Analysis (SHA)seqsha
Plot survival curves of the states in sequencesseqsplot
Aligning sequence data on a new start time.seqstart
Generate a survfit object for state survival times.seqsurv
Frequencies of state co-occurrence patternsseqtabstocc
Sort sequences by states at the successive positionssorti sortv
Converting into person-period format.toPersonPeriod
Converting TSE data into STS (state sequences) format.TSE_to_STS